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gene list
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Obtain Protein-Protein Interaction (PPI) table from a list of Gene IDs in R or Python.
Protein Protein Interaction
Gene List
BioGRID
PICKLE
R Programming
5.4 years ago
omarrafiqued
▴ 50
1
vote
7
replies
1.8k
views
How do I discern if a magnitude difference in expression is up-regulation in one group or down-regulation in another?
edgeR
R
differential gene expression
up-regulation
gene list
updated 7.2 years ago by
Gordon Smyth
53k • written 7.2 years ago by
philip.freda
• 0
0
votes
0
replies
855
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random gene list generator of given number and coding length
random generator
gene list
7.5 years ago
paul.hillman
• 0
3 results • Page
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Answer: Important: Bioconductor Release 3.22 Delayed
by
oliviamillerama
• 0
I completely understand delays like this because technical issues can happen anytime. It feels a bit like [Draw Climber][1] when one small …
Comment: VariantAnnotation does escape = within header string quotes
by
Daniel Cameron
▴ 40
I'm just stripping the entire line as a workaround using `meta(header(vcf))$DRAGENCommandLine = NULL`. Not ideal but at least subsequent pa…
Comment: Setting up a DESeq2 Design with Paired Data
by
Alexander
• 0
Hi Kevin, Firstly, thank you so much for not only a very prompt response, but one that is incredibly insightful and helps me learn DESeq2 …
Comment: featureCounts -L: high unassigned:mapq fraction
by
eja.gssssssse.r.m
• 0
If you re looking to enjoy a fun mobile experience, the 3 patti vegas game offers a seamless way to play classic card games on your phone. …
Answer: What R/Bioconductor tools would you recommend for the analysis of sncRNA, specif
by
Kevin Blighe
★ 4.0k
Hello Matthew, Thanks for the detailed description-this sounds like a classic challenge in sncRNA analysis, where piRNAs (and other tsRN…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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